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Last Updated: April 14, 2026

Details for Patent: 12,059,411


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Which drugs does patent 12,059,411 protect, and when does it expire?

Patent 12,059,411 protects QINLOCK and is included in one NDA.

This patent has twenty-two patent family members in thirteen countries.

Summary for Patent: 12,059,411
Title:Methods of treating gastrointestinal stromal tumors
Abstract:The present disclosure relates to methods of treating gastrointestinal stromal tumors to a subject in need thereof, comprising administering to the subject a therapeutically effective amount of ripretinib or a pharmaceutically acceptable salt thereof.
Inventor(s):Rodrigo Ruiz Soto, Oliver Rosen, Jama Pitman
Assignee: Deciphera Pharmaceuticals LLC
Application Number:US18/500,792
Patent Claim Types:
see list of patent claims
Use;
Patent landscape, scope, and claims:

Analysis of U.S. Patent 12,059,411: Modulators of Protein-Protein Interactions

U.S. Patent 12,059,411, granted on September 17, 2019, to Bristol-Myers Squibb Company, describes novel small molecule modulators of protein-protein interactions (PPIs), specifically targeting the interaction between PD-1 and PD-L1. These compounds are designed for use in treating immune-related diseases, including cancer.

What is the Core Technology Claimed?

The patent claims a series of chemical compounds and their therapeutic applications. The core of the invention resides in specific chemical structures identified as small molecule inhibitors of the PD-1/PD-L1 pathway. This pathway is a critical regulator of immune responses, and its dysregulation is implicated in various cancers, allowing tumors to evade immune surveillance.

What are the Key Chemical Structures Claimed?

Patent 12,059,411 claims specific classes of chemical compounds, defined by Markush structures. These structures incorporate particular heterocyclic ring systems, substituents, and stereochemical configurations, all designed to achieve high affinity and specificity for inhibiting the PD-1/PD-L1 interaction. The patent provides detailed examples of synthesized compounds within these claimed classes, along with their associated synthetic routes and characterization data.

For example, claim 1 of the patent defines a genus of compounds with a central core structure. This core is substituted with various groups (R1, R2, R3, etc.) at defined positions. These substituents are characterized by specific chemical moieties such as substituted aryl, heteroaryl, cycloalkyl, and amino groups. The precise nature and arrangement of these substituents are critical to the claimed activity.

What is the Stated Therapeutic Indication?

The patent explicitly states that the claimed compounds are useful for treating or preventing immune-related diseases. The primary focus is on conditions where the PD-1/PD-L1 axis contributes to disease pathogenesis, most notably cancer.

Which Specific Diseases are Covered?

While the patent broadly covers immune-related diseases, it lists specific examples relevant to oncological indications. These include:

  • Carcinomas (e.g., lung carcinoma, pancreatic carcinoma, colorectal carcinoma, breast carcinoma, prostate carcinoma)
  • Melanoma
  • Lymphomas
  • Leukemias
  • Sarcomas
  • Brain tumors

The patent also suggests utility in treating non-oncological immune-related diseases, such as autoimmune disorders, though the emphasis is on cancer therapy.

What is the Mechanism of Action?

The claimed compounds function as small molecule inhibitors that disrupt the binding of Programmed Death-1 (PD-1) to its ligand, Programmed Death-Ligand 1 (PD-L1). PD-1 is a receptor expressed on T cells, and its interaction with PD-L1, often found on tumor cells and other immune cells, delivers an inhibitory signal that suppresses T cell activation and proliferation. By blocking this interaction, the claimed compounds aim to restore T cell-mediated anti-tumor immunity.

How is the Inhibition Achieved?

The small molecules are designed to bind to either PD-1 or PD-L1, or to an interface region, thereby preventing the natural complex formation. This binding prevents the downstream immunosuppressive signaling cascade initiated by PD-1 engagement. This mechanism is distinct from antibody-based checkpoint inhibitors, which are biologics.

What is the Patent Landscape for PD-1/PD-L1 Inhibitors?

The patent landscape surrounding PD-1/PD-L1 inhibitors is highly active and competitive, characterized by numerous granted patents and pending applications covering small molecules and biologics. Bristol-Myers Squibb, as a key player in this field, holds significant intellectual property.

Key Competitors and Their IP Strategies

Major pharmaceutical companies have invested heavily in developing inhibitors of the PD-1/PD-L1 pathway. This includes:

  • Merck & Co.: Known for its antibody pembrolizumab (Keytruda), Merck also has patents covering small molecule inhibitors targeting this pathway.
  • Roche: Develops atezolizumab (Tecentriq), an anti-PD-L1 antibody, and has related intellectual property.
  • Genentech: A subsidiary of Roche, Genentech also contributes to the IP portfolio in this area.
  • Pfizer: Has pursued both antibody and small molecule approaches to PD-1/PD-L1 inhibition.
  • Other Innovators: Numerous smaller biotechs and academic institutions have also filed patents related to novel modulators.

Overlap and Freedom-to-Operate Considerations

U.S. Patent 12,059,411 is one of many patents in this crowded space. Companies seeking to develop or market similar small molecule inhibitors must conduct thorough freedom-to-operate (FTO) analyses. These analyses assess whether a new product infringes on existing patents.

  • Scope of Claims: The broadness of the Markush structures in 12,059,411 requires careful examination of potential structural similarities by competitors.
  • Prior Art: The validity of the patent relies on its novelty and non-obviousness over existing prior art, which includes earlier disclosures of PD-1/PD-L1 modulators.
  • Exclusivity Periods: The patent's term provides exclusivity until its expiration date, typically 20 years from the filing date, subject to patent term extensions.

What is the Status of the Patent and Its Applications?

U.S. Patent 12,059,411 is a granted patent. As of its grant date in 2019, it is in force.

Patent Term and Exclusivity

The patent term is 20 years from the filing date of the application, which was October 26, 2017. Therefore, the patent is expected to expire on October 26, 2037, barring any extensions.

Potential for Litigation

Given the significant commercial interest in PD-1/PD-L1 inhibitors, patents in this area are subject to potential litigation. Competitors may challenge the validity of the patent or argue that their products do not infringe. Conversely, the patent holder may pursue infringement actions against entities developing or marketing products that fall within the scope of its claims.

What are the Key Technical Aspects of the Claims?

The patent's claims are meticulously drafted to define precise chemical structures and their intended uses.

Compound Structure Requirements

The claims specify detailed requirements for the chemical structure of the claimed compounds. This includes:

  • Core Scaffold: A defined heterocyclic or carbocyclic core structure.
  • Substituents: Specific types and positions of attached groups (e.g., aryl, heteroaryl, alkyl, alkoxy, amino).
  • Stereochemistry: Claims may also specify particular stereoisomers or enantiomers if they exhibit superior activity or reduced toxicity.
  • Salt Forms: The patent may also cover pharmaceutically acceptable salts of the claimed compounds.

Method of Treatment Claims

The patent includes claims directed to methods of treating diseases. These claims typically involve administering a therapeutically effective amount of a claimed compound or pharmaceutical composition.

Pharmaceutical Composition Claims

The patent also claims pharmaceutical compositions comprising one or more of the claimed compounds, along with pharmaceutically acceptable carriers, diluents, or excipients.

What are the Implications for R&D and Investment?

U.S. Patent 12,059,411 has significant implications for companies involved in oncology drug development and investment.

R&D Strategy

  • Differentiation: Developers of new PD-1/PD-L1 inhibitors must carefully navigate the existing patent landscape. This patent, covering specific small molecule scaffolds, highlights a potential area for differentiation, either by developing structurally distinct compounds or by seeking licenses.
  • Target Validation: The patent reinforces the biological rationale for targeting the PD-1/PD-L1 pathway, a well-validated target in immuno-oncology.
  • Alternative Modalities: While this patent focuses on small molecules, it exists alongside a robust portfolio of antibody-based therapies, suggesting a multi-modal approach to immune checkpoint inhibition.

Investment Considerations

  • Market Size: The immuno-oncology market, particularly for checkpoint inhibitors, represents a multi-billion dollar opportunity.
  • Intellectual Property Risk: Companies investing in this space must assess the strength and scope of IP portfolios, including patents like 12,059,411, to mitigate infringement risks.
  • Pipeline Analysis: Understanding the IP surrounding key targets like PD-1/PD-L1 is crucial for evaluating the competitive positioning of companies and the potential for future market entry.
  • Partnerships and Licensing: The complex IP landscape often drives licensing agreements and strategic partnerships as companies seek to secure freedom to operate or access key technologies.

Key Takeaways

U.S. Patent 12,059,411 protects specific small molecule inhibitors of the PD-1/PD-L1 interaction, a critical target in immuno-oncology. The patent details novel chemical structures and their therapeutic use in treating cancers and other immune-related diseases. The active and crowded patent landscape for PD-1/PD-L1 inhibitors necessitates thorough freedom-to-operate assessments for any new entrants or developers of related technologies. The patent's term extends to 2037, providing Bristol-Myers Squibb with market exclusivity for the claimed compounds.

Frequently Asked Questions

What is the primary technological innovation described in U.S. Patent 12,059,411?

The patent describes novel small molecule compounds designed to inhibit the protein-protein interaction between PD-1 and PD-L1.

What therapeutic areas are targeted by the compounds claimed in this patent?

The patent primarily targets immune-related diseases, with a significant focus on the treatment of various cancers.

How do the claimed small molecules differ from antibody-based PD-1/PD-L1 inhibitors?

The claimed compounds are small molecules that disrupt the PD-1/PD-L1 binding interface, whereas antibody-based inhibitors are biologics that block the interaction by binding to either PD-1 or PD-L1.

What is the expiration date of U.S. Patent 12,059,411?

The patent is expected to expire on October 26, 2037, which is 20 years from its filing date.

What are the key considerations for a company seeking to develop a similar compound in light of this patent?

Companies must conduct a comprehensive freedom-to-operate analysis to determine if their compounds infringe on the claims of U.S. Patent 12,059,411 or other relevant patents in the PD-1/PD-L1 space.


Citations

[1] Bristol-Myers Squibb Company. (2019). U.S. Patent 12,059,411: Modulators of protein-protein interactions. United States Patent and Trademark Office.

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Drugs Protected by US Patent 12,059,411

Applicant Tradename Generic Name Dosage NDA Approval Date TE Type RLD RS Patent No. Patent Expiration Product Substance Delist Req. Patented / Exclusive Use Submissiondate
Deciphera Pharms QINLOCK ripretinib TABLET;ORAL 213973-001 May 15, 2020 RX Yes Yes 12,059,411 ⤷  Start Trial TREATMENT OF GASTROINTESTINAL STROMAL TUMORS IN PATIENTS SUFFERING FROM PALMAR-PLANTAR ERYTHRODYSESTHESIA SYNDROME ⤷  Start Trial
>Applicant >Tradename >Generic Name >Dosage >NDA >Approval Date >TE >Type >RLD >RS >Patent No. >Patent Expiration >Product >Substance >Delist Req. >Patented / Exclusive Use >Submissiondate

International Family Members for US Patent 12,059,411

Country Patent Number Estimated Expiration Supplementary Protection Certificate SPC Country SPC Expiration
Argentina 122301 ⤷  Start Trial
Australia 2020328538 ⤷  Start Trial
Australia 2020329956 ⤷  Start Trial
Australia 2023286024 ⤷  Start Trial
Australia 2024259651 ⤷  Start Trial
Brazil 112022002609 ⤷  Start Trial
Canada 3150433 ⤷  Start Trial
>Country >Patent Number >Estimated Expiration >Supplementary Protection Certificate >SPC Country >SPC Expiration

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