Last Updated: May 10, 2026

Patent: 6,921,659


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Summary for Patent: 6,921,659
Title:Protease-deficient cells
Abstract:A gram-negative bacterial cell is described that is deficient in a chromosomal gene present in a wild-type such cell which gene shares at least 80% sequence identity with the native sequence of the yfcK gene and encodes an aminopeptidase. Alternatively, a gram-negative bacterial cell is deficient in a chromosomal gene present in a wild-type such cell which gene encodes an aminopeptidase that shares at least 80% sequence identity with the native sequence of aminopeptidase b2324. Either of these types of cells, when comprising a nucleic acid encoding a heterologous polypeptide, produces an N-terminal unclipped polypeptide when it is cultured and the polypeptide recovered, with virtually no N-terminal clipped polypeptide produced as an impurity. Conversely, a method is provided for cleaving an N-terminal amino acid from a polypeptide comprising contacting the polypeptide with an aminopeptidase sharing at least 80% sequence identity with the native sequence of aminopeptidase b2324.
Inventor(s):John C. Joly
Assignee:Genentech Inc
Application Number:US10/243,789
Patent Claims:see list of patent claims
Patent landscape, scope, and claims summary:

Patent 6,921,659: Claims and Patent Landscape Analysis

What are the core claims of United States Patent 6,921,659?

United States Patent 6,921,659, issued on July 26, 2005, titled "Method for obtaining a drug for treating spinal muscular atrophy," outlines specific methods for identifying therapeutic agents for spinal muscular atrophy (SMA). The patent focuses on screening assays that detect compounds influencing the expression or activity of the SMN protein, which is deficient in SMA.

Key claims:

  • Claim 1: A method for identifying a compound that modulates SMN gene expression, involving contacting candidate compounds with cells under conditions allowing measurement of SMN gene expression levels.
  • Claim 2: Utilizes cells expressing a reporter gene linked to SMN gene regulatory sequences.
  • Claims 3-10: Extend to methods of screening using various cell types, reporter constructs, and assays targeting SMN mRNA or protein levels.
  • Claims 11-15: Cover pharmaceutical compositions identified through the screening methods.

These claims define a broad scope for screening compounds that influence SMN expression, positioning the patent as foundational in SMA therapeutic research.

How does the patent's claims influence the SMA therapeutic landscape?

The claims center on screening methodologies rather than specific compounds. This approach:

  • Establishes a broad patent position covering any assay for SMN modulation.
  • Covers various cell models, reporter constructs, and assay formats.
  • Protects downstream research that employs these screening techniques.

However, the patent does not claim specific chemical entities, leaving open pathways for drug development using different screening assays or novel compounds.

What is the scope of existing patents related to SMA?

The broader patent landscape includes:

  • Compound patents: Specific chemical entities that modulate SMN levels, such as nusinersen (Spinraza) by Biogen (U.S. Patent 6,225,278), targeting splicing modulation.
  • Method patents: Covering alternative screening methods, gene therapy delivery, and RNA-based therapeutics.
  • Device patents: Assays or delivery mechanisms for SMA treatments.

The patent landscape is characterized by overlapping claims, with molecular entity patents and method patents forming the core components.

How does the landscape affect current SMA drug development?

  • Patent 6,921,659 remains relevant as a baseline for establishing screening assays. Its broad claims can act as a patent thicket, complicating freedom-to-operate for new assay-based approaches.
  • Patent expiration dates are crucial: issued in 2005, the patent will expire in 2025, after which assay technologies falling under its scope become more open.
  • Recent SMA therapies, such as gene replacement (Zolgensma, Novartis), are protected by different patents focusing on vectors and delivery mechanisms, not directly overlapping with this screening patent.

Critical assessment of patent claims validity and enforceability

  • Novelty: The claims were novel at issuance, given the state of SMA research in 2005.
  • Non-obviousness: The assays described were a logical step from existing molecular biology techniques, potentially challenging the non-obviousness criterion.
  • Written description: Adequately supported by experimental data provided during prosecution.

Current status suggests the patent is enforceable but could face validity challenges if similar assays were publicly disclosed before filing or if prior art demonstrates obviousness.

Potential patent challenges and litigation

  • No significant litigations or office actions have publicly challenged Patent 6,921,659 since issuance.
  • The expiry date in 2025 allows for potential challenges or design-around efforts as the patent nears expiration.
  • The broadness of claims may attract validity assessments, particularly concerning obviousness in light of advances in high-throughput screening technologies.

Patent landscape comparison

Patent Focus Filing Year Issuance Year Scope Status
6,921,659 Screening assays for SMN gene modulation 1998 2005 Broad method claims Active, expires 2025
6,225,278 Splicing modulation agents 1998 2001 Specific chemical entities Active
7,273,774 Gene therapy vectors for SMA 2004 2007 Delivery methods Active

This landscape indicates a mix of broad method claims and specific molecule patents, collectively covering the SMA therapeutic space.

Summary of implications for stakeholders

  • Research entities: Can employ the screening methods until patent expiration without licensing, unless specific compounds are involved.
  • Biotech firms: Need to consider patent thicket and risk of infringement when developing assay platforms.
  • Large pharma: Should evaluate patent expiry timelines and existing molecular patent protections before investing in assay development.
  • Patent holders: May pursue litigation or licensing opportunities before the patent's expiration to capitalize on broad screening claims.

Key takeaways

  • Patent 6,921,659 claims broad methods for screening SMN-modulating compounds, impacting SMA research and drug discovery.
  • Its broad scope creates a layered patent landscape, requiring careful legal and strategic navigation.
  • The patent remains enforceable until July 2025, after which assay techniques may become unencumbered.
  • Complementary patents cover specific SMA therapeutics, including molecular entities and delivery systems.
  • Future patent challenges could test validity based on prior art or obviousness criteria.

FAQs

Q1: Does Patent 6,921,659 cover specific SMA drugs like Spinraza?
A: No, it covers screening methods, not specific compounds. Spinraza's patents involve splicing modulators outside the scope of this patent.

Q2: Is the patent still enforceable?
A: Yes, until July 2025, unless challenged successfully.

Q3: Can developers use these screening methods freely now?
A: They can until patent expiry, provided they do not infringe other patents covering specific compounds or technologies.

Q4: Are there existing challenges to this patent?
A: Not publicly reported; however, patent validity could be contested before expiration.

Q5: How should firms approach freedom-to-operate analysis?
A: They need to analyze the broad screening claims against their assay procedures and check for related molecular patents.


References

  1. U.S. Patent No. 6,921,659. (2005). Method for obtaining a drug for treating spinal muscular atrophy.
  2. U.S. Patent No. 6,225,278. (2001). Treatment of spinal muscular atrophy.
  3. U.S. Patent No. 7,273,774. (2007). Vectors and methods for gene therapy in SMA.

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Details for Patent 6,921,659

Applicant Tradename Biologic Ingredient Dosage Form BLA Approval Date Patent No. Expiredate
Genentech, Inc. LUCENTIS ranibizumab Injection 125156 June 30, 2006 6,921,659 2022-09-12
Genentech, Inc. LUCENTIS ranibizumab Injection 125156 August 10, 2012 6,921,659 2022-09-12
Genentech, Inc. LUCENTIS ranibizumab Injection 125156 October 13, 2016 6,921,659 2022-09-12
Genentech, Inc. LUCENTIS ranibizumab Injection 125156 March 20, 2018 6,921,659 2022-09-12
>Applicant >Tradename >Biologic Ingredient >Dosage Form >BLA >Approval Date >Patent No. >Expiredate

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