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Last Updated: April 26, 2024

Claims for Patent: 6,030,792


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Summary for Patent: 6,030,792
Title: Assays for measurement of protein fragments in biological media
Abstract:This invention provides novel antibodies and engineered versions thereof and methodology for monitoring biological media for protein fragments, especially collagen fragments resulting from collagenase cleavage of type II collagen.
Inventor(s): Otterness; Ivan G. (Groton, CT), Mezes; Peter S. (Old Lyme, CT), Downs; James T. (Norwich, CT), Johnson; Kimberly S. (Gales Ferry, CT)
Assignee: Pfizer Inc (New York, NY)
Application Number:09/184,658
Patent Claims:1. A method for monitoring biological media for protein fragments which comprises;

contacting said biological media with a capture antibody; said capture antibody being active against the sequences set forth in the Sequence Listing as SEQ ID NOS: 1 and 2; and

contacting said biological media with a detection antibody; said capture antibody being active against the sequences set forth in the Sequence Listing as SEQ ID NOS: 3 and 4; and

detecting the amount of collagen fragments bound to said capture and detection antibodies; or

contacting said biological media with a capture antibody; said capture antibody being active against the sequences set forth in the Sequence Listing as SEQ ID NOS: 3 and 4; and

contacting said biological media with a detection antibody; said detection antibody being active against the sequences set forth in the Sequence Listing as SEQ ID NOS: 1 and 2; and

detecting the amount of collagen fragments bound to said capture and detection antibodies.

2. A method of claim 1 wherein said protein fragments are collagen fragments generated by collagenase cleavage of articular cartilage.

3. A method of claim 2 wherein said protein fragments are generated from collagenase cleavage of type II collagen.

4. A method of claim 2 wherein said capture and detection antibodies are monoclonal antibodies.

5. A method of claim 1 wherein said capture and detection antibodies are monoclonal antibodies.

6. A method of claim 1 wherein said capture antibody is a genetically engineered antibody.

7. A method of claim 1 wherein said detection antibody is a genetically engineered antibody.

8. A method of claim 1 wherein said capture antibody, designated 9A4, has the V.sub.H sequence as set forth in the Sequence Listing as SEQ ID NOS: 5 and 32 and the V.sub.L sequence as set forth in the Sequence Listing as SEQ ID NOS: 6 and 33.

9. A method of claim 1 wherein said detection antibody, designated 5109, has the V.sub.H sequence as set forth in the Sequence Listing as SEQ ID NOS: 10 and 48 and the V.sub.L sequence as set forth in the Sequence Listing as SEQ ID NOS: 11 and 49.

10. An antibody of claim 1 which is labeled to facilitate detection.

11. An antibody of claim 10 wherein said label is radioactive, optical, enzymatic, fluorescent polarizing or fluorescent quenching.

12. An antibody of claim 1 which is labeled to facilitate capture of said antibody.

13. An antibody of claim 12 wherein said label is biotin or magnetic particles.

14. A method for monitoring biological media for protein fragments which comprises;

contacting said biological media with an antibody active against the sequences set forth in the Sequence Listing as SEQ ID NOS: 3 and 4; and

detecting the amount of protein fragments bound to said antibody.

15. A method of claim 14 wherein said protein fragments are collagen fragments.

16. A method of claim 14 wherein said antibody is a monoclonal antibody.

17. A method of claim 14 wherein said antibody is a genetically engineered antibody.

18. A method of claim 14 wherein said antibody, designated 5109, has the V.sub.H sequence as set forth in the Sequence Listing as SEQ ID NOS: 10 and 48 and the V.sub.L sequence as set forth in the Sequence Listing as SEQ ID NOS: 11 and 49.

19. The antibody, designated 9A4, having the V.sub.H sequence as set forth in the Sequence Listing as SEQ ID NOS: 5 and 32 and the V.sub.L sequence as set forth in the Sequence Listing as SEQ ID NOS: 6 and 33.

20. The antibody, designated 5109, having the V.sub.H sequence as set forth in the Sequence Listing as SEQ ID NOS: 10 and 48 and the V.sub.L sequence as set forth in the Sequence Listing as SEQ ID NOS: 11 and 49.

21. A cell line that produces a specific binding partner that binds to peptides consisting essentially of the structures as set forth in the Sequence Listing as SEQ ID NOS: 1 or 2 wherein the cell line is ATCC HB-12436.

22. A cell line that produces a specific binding partner that binds to peptides consisting essentially of the structures as set forth in the Sequence Listing as SEQ ID NOS: 3 or 4 wherein the cell line is ATCC HB-12435.

23. A genetically engineered form of antibody 9A4 such as that expressed by E. coli p9A4ICAT7-1 or p9A4IF-5 deposited as ATCC-98593 and ATCC-98592, respectively.

24. A genetically engineered form of antibody 5109 such as that derived from E. coli p5109CscFv7, which may be substituted for 5109 deposited as ATCC-98594.

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