Last Updated: November 8, 2026

Details for Patent: 6,645,988

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Summary for Patent: 6,645,988
Title:Substituted benzimidazole dosage forms and method of using same
Abstract:The present invention relates to pharmaceutical preparations comprising substituted benzimidazole proton pump inhibitors. There is provided a liquid or solid pharmaceutical dosage form that is not enteric coated or delayed released containing a proton pump inhibitor and a Primary Essential Buffer. When the dosage form is placed in a liquid phase the Primary Essential Buffer maintains the pH of the environment at a value greater than the pKa of the proton pump inhibitor for a time sufficient to substantially avoid acid degradation of the proton pump inhibitor in the environment. Also provided is a method for treating acid-related gastrointestinal disorders by administering a solid pharmaceutical dosage form; and a kit for the preparation of a liquid oral pharmaceutical composition.
Inventor(s):Jeffrey O. Phillips
Assignee: University of Missouri Columbia
Application Number:US09/901,942
Patent Claim Types:
see list of patent claims
Use; Composition; Dosage form;
Patent landscape, scope, and claims:

United States Drug Patent 6,645,988: Claims, Scope, Expiration, Litigation, and Patent Landscape

US Patent 6,645,988 protected non-enteric-coated oral dosage forms combining a proton pump inhibitor with a substantial buffering system. The patent covered omeprazole, lansoprazole, pantoprazole, rabeprazole, esomeprazole and several less-commercialized PPIs, including specified solid dosage forms, layered tablets, gastric-pH control methods and manufacturing processes.

The patent issued on November 11, 2003, from an application claiming priority to May 17, 1999. Its standard 20-year patent term expired in 2020, subject to any applicable patent-term adjustment or extension. The patent is no longer a blocking patent for current generic development. Its commercial importance was historically tied to Zegerid, the omeprazole/sodium bicarbonate product developed by Santarus.

What does US Patent 6,645,988 protect?

The patent protects a formulation architecture that replaces enteric coating with an alkaline buffering system. The buffer raises gastric pH and protects the acid-labile PPI after administration.

The central limitations are:

Claim element Scope
Dosage form Solid oral pharmaceutical dosage form
Coating Not enteric-coated
Active pharmaceutical ingredient One or more specified PPIs or related enantiomers, isomers, free bases or salts
PPI dose Approximately 5 mg to 300 mg
Buffer loading Approximately 0.1 mEq to 2.5 mEq per mg of PPI
Dosage forms Suspension tablet, chewable tablet, two-part tablet, effervescent powder or effervescent tablet
Excipients Pharmaceutically acceptable excipients, including flavors and anti-foaming agents
Method claims Gastric-fluid pH elevated to specified levels during stomach dwell time
Process claims Blending and formulating the PPI, buffer and excipients

The claims do not cover every PPI formulation. A potentially infringing product would generally need to satisfy the specified PPI identity, dose, buffer-equivalent range, non-enteric-coated configuration and dosage-form limitations.

How broad are the independent claims?

Claims 1, 24, 25 and 29 are the principal scope-defining claims.

Claim 1: non-enteric-coated buffered dosage form

Claim 1 requires:

  1. A solid oral dosage form;
  2. No enteric coating;
  3. A specified PPI;
  4. A total buffer amount of approximately 0.1 to 2.5 mEq per milligram of PPI;
  5. A listed dosage-form category; and
  6. A pharmaceutically acceptable excipient.

The use of "consisting essentially of" narrows the active-ingredient definition. The phrase generally permits additional ingredients that do not materially affect the basic and novel characteristics of the formulation, while excluding additional active ingredients that materially change the claimed composition.

The claim is broad across the listed PPIs but narrower than a generic claim to any acid-labile drug combined with an alkaline excipient.

Claim 24: outer-layer and inner-core architecture

Claim 24 covers a two-region solid dosage form:

  • The outer layer contains at least one Primary Essential Buffer.
  • The inner core contains the PPI and a Primary Essential Buffer or Secondary Essential Buffer.
  • The total PPI and buffer quantities must fall within the specified ranges.
  • The dosage form must remain non-enteric-coated.

This claim is directed to spatial distribution of the buffer rather than merely the presence of buffer in the overall tablet. A product using a buffered outer layer and PPI-containing core could face claim 24 analysis even if its formulation differs from a simple physical blend.

Claim 25: gastric-pH method

Claim 25 covers administering the claim 1 dosage form in an amount effective to raise gastric-fluid pH to at least 3.7 from the time the PPI contacts gastric fluid throughout stomach dwell time.

Claims 26 to 28 increase the pH threshold to at least 4.6, 4.8 and 5.6. These are functional method claims. In an infringement dispute, gastric-pH performance, formulation behavior and the relevant dwell-time evidence would be central.

Claim 29: blending and formulation process

Claim 29 independently recites the non-enteric-coated formulation and adds a manufacturing sequence:

  1. Blend the PPI, buffer and excipient.
  2. Formulate the blend into a powder, tablet, suspension tablet, chewable tablet, capsule, two-part tablet, two-part capsule, pellet, granule or effervescent tablet.

Claim 29 is broader in dosage-form coverage than claim 1 because it expressly includes capsules, pellets and granules. It is also operationally important because a product may be evaluated under both product-composition and process theories.

Which PPIs and buffers are covered?

PPI coverage

The patent’s Markush group includes:

PPI named in the claims Commercial relevance
Omeprazole Core commercial application, including Zegerid
Lansoprazole Commercial PPI, but not the principal product associated with the patent
Pantoprazole Commercial PPI
Rabeprazole Commercial PPI
Esomeprazole Commercial PPI
Pariprazole Limited commercial relevance
Leminoprazole Limited commercial relevance

The claims also extend to an enantiomer, isomer, free base or salt of the listed compound. That language creates broader chemical coverage than a claim limited to one named salt or stereoisomer, although claim construction would depend on the particular molecular form and prosecution history.

Primary Essential Buffers

Claim 10 lists the principal buffer class. It includes:

  • Sodium bicarbonate
  • Sodium sesquicarbonate
  • Dibasic sodium phosphate
  • Sodium tripolyphosphate
  • Tetrasodium pyrophosphate
  • Sodium citrate
  • Calcium citrate
  • Calcium carbonate
  • Magnesium oxide
  • Sodium gluconate
  • Sodium lactate
  • Sodium acetate
  • Dipotassium phosphate
  • Tetrapotassium pyrophosphate
  • Potassium bicarbonate
  • Calcium lactate
  • Calcium glycerophosphate
  • Calcium gluconate
  • Magnesium lactate
  • Magnesium gluconate
  • Magnesium hydroxide

Claim 11 narrows the buffer to sodium bicarbonate. Claims 12 and 13 specify sodium bicarbonate quantities of approximately 400 mg to 4,000 mg and at least approximately 800 mg.

Claim 14 narrows the buffer to calcium carbonate. Claims 15 to 17 specify calcium carbonate quantities ranging from approximately 400 mg to 4,000 mg, approximately 500 mg to 1,000 mg, or at least approximately 700 mg.

Claim 23 covers a combination of sodium bicarbonate and calcium carbonate.

Secondary Essential Buffers

Claim 18 lists:

  • Sodium carbonate
  • Potassium carbonate
  • Trisodium phosphate
  • Tripotassium phosphate
  • Calcium hydroxide
  • Sodium hydroxide

The claim structure permits a Primary Essential Buffer alone or a Primary Essential Buffer combined with a Secondary Essential Buffer. The total buffer-equivalent amount, rather than only the mass of buffer, is a key limitation.

What formulation types are protected?

The patent reaches several non-enteric-coated dosage technologies.

Suspension and chewable tablets

These dosage forms are designed to be dispersed or chewed before swallowing. The formulation must still deliver the specified PPI and buffer relationship. A product marketed as a chewable or suspension tablet can fall within claim 1 if the quantitative and chemical limitations are met.

Two-part tablets and capsules

The two-part architecture can separate the PPI from part of the buffer or distribute the buffer between an outer component and an inner core. Claim 24 is particularly relevant to layered or core-shell products.

Effervescent products

Effervescent powders and tablets are expressly listed in claim 1. Carbonate and bicarbonate systems may provide both acid neutralization and effervescence, but the product must satisfy the claimed buffer-equivalent range.

Flavoring and excipient systems

Claims 19 and 20 cover flavoring agents, including fruit, caramel, chocolate, root beer, coffee, mint, licorice and related flavors. Claim 21 covers anti-foaming agents. Claim 22 lists conventional excipients such as binders, diluents, lubricants, disintegrants, colorants, antioxidants, chelating agents, anti-caking agents, moistening agents, preservatives and coatings.

These dependent claims generally add formulation detail. They do not independently rescue a product that fails the core PPI, buffer, dosage-form or non-enteric-coating limitations.

What was the commercial product associated with the patent?

The principal commercial product was Zegerid, an immediate-release omeprazole and sodium bicarbonate product. The product used sodium bicarbonate to create an alkaline gastric environment and avoid reliance on an enteric-coated PPI pellet system.

The FDA approved prescription Zegerid capsules and powder-for-suspension products under NDA 21-302 on September 9, 2004. The product was associated with Santarus, which later became part of the Salix and Valeant, now Bausch Health, corporate history. FDA labeling identifies omeprazole and sodium bicarbonate as the active ingredients and describes the product as an immediate-release formulation rather than a conventional enteric-coated omeprazole product (FDA, 2004; DailyMed, 2024).

The patent’s claims are broader than the commercial Zegerid presentation because they cover several PPIs, multiple buffers and multiple solid dosage forms.

When did US Patent 6,645,988 expire?

The patent’s ordinary term ran approximately 20 years from the earliest effective nonprovisional filing date. Based on the May 17, 1999 priority date and the patent’s prosecution history, the expected expiration was in 2020.

Milestone Date or period
Earliest claimed priority May 17, 1999
US application filing 2000
Patent issued November 11, 2003
FDA approval of prescription Zegerid September 9, 2004
Expected ordinary patent expiration 2020
Current status Expired; no current exclusionary term

The issue date did not create a 17-year post-issuance term because the application was filed after the 1995 transition to the 20-year-from-filing patent term system. The patent therefore could not remain enforceable merely because it issued in 2003.

What was the Orange Book status of US Patent 6,645,988?

US Patent 6,645,988 was historically relevant to the Orange Book listing for prescription Zegerid. Orange Book listings identify patents submitted by the NDA holder and do not independently determine infringement, validity or current enforceability.

The principal regulatory implications were:

  • A generic applicant referencing the protected NDA could face a Paragraph IV certification.
  • A timely patent-infringement action could trigger a 30-month stay under the Hatch-Waxman framework.
  • After patent expiration, the patent no longer supplied a live statutory barrier to ANDA approval.
  • Orange Book listing status after expiration does not revive patent rights.

FDA Orange Book records should be read together with the patent register and the patent’s official USPTO status. An Orange Book listing is not a substitute for a current patent-term determination (FDA, 2024; USPTO, 2024).

Which companies challenged the patent?

The leading reported challenge involved Par Pharmaceutical.

Santarus v. Par Pharmaceutical

Santarus asserted US Patent 6,645,988 and related US Patent 6,780,882 against Par in Hatch-Waxman litigation involving an ANDA for an omeprazole/sodium bicarbonate product. The dispute examined obviousness, written description, enablement and infringement issues relating to buffered PPI formulations.

The Federal Circuit decision in Santarus, Inc. v. Par Pharmaceutical, Inc., 694 F.3d 1344 (Fed. Cir. 2012), upheld the district court’s treatment of the asserted claims and addressed the patentability of the buffered PPI formulation technology. The case is significant because it confirmed that the combination of a PPI with a sufficient alkaline buffer could support patent protection despite earlier PPI products and conventional antacid technologies.

The litigation did not extend the patent term. Any settlement or launch restriction ultimately remained bounded by the patent’s statutory expiration and the terms of the parties’ agreement.

How strong was the patent estate?

The patent estate was commercially meaningful but structurally concentrated.

Strength factor Assessment
Core formulation concept Strong historical value for immediate-release buffered omeprazole
Chemical breadth Broad across multiple PPIs and salt or stereochemical forms
Buffer breadth Broad Markush coverage, with detailed bicarbonate and calcium carbonate claims
Dosage-form breadth Moderate to broad, particularly under claim 29
Functional method claims Potentially useful but dependent on gastric-pH evidence
Manufacturing coverage Useful process coverage through blending and formulation limitations
Litigation record Strengthened by reported Santarus v. Par litigation
Remaining term No current term after expiration in 2020
Current blocking power None from this patent alone

The main vulnerability was that the claims required a defined relationship between PPI quantity and buffer capacity. A competing product using a different PPI, a different buffer system, a materially different buffer-equivalent ratio or an enteric-coated delivery system could avoid at least some claims.

How does this patent compare with other PPI patent strategies?

Buffered immediate-release strategy

US 6,645,988 focuses on gastric pH control through alkaline buffering. Its commercial advantage was avoidance of an enteric-coated PPI delivery system.

Enteric-coated PPI strategy

Many conventional omeprazole, lansoprazole, pantoprazole and rabeprazole products use enteric-coated pellets, granules or tablets. Those patents typically focus on:

  • Enteric polymers;
  • Layered pellet structures;
  • Stabilizers and alkaline cores;
  • Release thresholds;
  • Particle size and dissolution;
  • Manufacturing processes.

An enteric-coated product ordinarily does not satisfy the express non-enteric-coated limitation in claims 1, 24 and 29, although other patents may apply.

Combination-product strategy

A product combining a PPI with an analgesic, prokinetic agent or other active ingredient could raise issues under "consisting essentially of" language. The analysis would turn on whether the additional active ingredient materially changes the claimed formulation and whether the product still satisfies the other limitations.

What generic entry risks existed?

Before expiration, generic developers faced four principal risks:

  1. Paragraph IV litigation. An ANDA applicant could certify that the patent was invalid, unenforceable or not infringed.
  2. Product-by-process overlap. A generic could avoid one process claim but still face composition claims.
  3. Functional pH limitations. A product that produced the required gastric pH could create method-claim exposure.
  4. Layered dosage-form overlap. A core-shell or two-part product could implicate claim 24 even if its excipient profile differed.

After expiration, the patent-specific risk became negligible. Current generic products must still satisfy FDA quality, bioequivalence, labeling and manufacturing requirements, but US 6,645,988 no longer prevents approval or launch.

What biosimilar risk applies?

No biosimilar pathway applies. Omeprazole and sodium bicarbonate are small-molecule active ingredients regulated through the ANDA pathway under section 505(j) of the Federal Food, Drug, and Cosmetic Act. The relevant competitive products are generics, not biosimilars under section 351(k) of the Public Health Service Act.

The commercial barriers are therefore formulation development, bioequivalence, stability, manufacturing scale, supply reliability and regulatory approval rather than biologic similarity or interchangeability.

What manufacturing and geographic barriers remain?

The patent was a US patent. Its expiration removed the US patent barrier, but corresponding foreign family members would have required separate review in each jurisdiction. Patent expiration in the United States does not automatically establish freedom to operate in Europe, Canada, Japan, China or other markets.

Current manufacturing barriers are primarily technical:

  • Maintaining PPI stability in the presence of alkaline buffers;
  • Controlling moisture and carbonate reactions;
  • Managing effervescence and tablet hardness;
  • Achieving consistent gastric dispersion;
  • Controlling flavor and palatability;
  • Demonstrating bioequivalence for immediate-release products;
  • Preventing dose variability in high-buffer formulations.

These barriers can affect launch timing and cost without creating patent exclusivity.

Key Takeaways

  • US Patent 6,645,988 covered non-enteric-coated solid oral PPI formulations buffered to raise gastric pH.
  • Claim 1 is the principal broad composition claim.
  • Claim 24 targets layered outer-layer and inner-core products.
  • Claim 25 and claims 26 to 28 cover gastric-pH administration methods.
  • Claim 29 covers blending and formulation processes and expressly includes capsules, pellets and granules.
  • Omeprazole and sodium bicarbonate were the core commercial embodiment associated with Zegerid.
  • The patent was historically listed in connection with prescription Zegerid and was litigated against Par Pharmaceutical.
  • The expected patent term ended in 2020.
  • The patent does not create a current US generic-entry barrier.
  • Current competition is governed by ANDA approval, bioequivalence, formulation quality and manufacturing execution, not biosimilar regulation.

FAQs About US Patent 6,645,988

Does US 6,645,988 cover Zegerid?

Yes. Zegerid’s immediate-release omeprazole/sodium bicarbonate formulation was within the commercial field addressed by the patent, although the patent’s claim language extends beyond the marketed product.

Can a generic omeprazole product infringe this patent today?

US 6,645,988 is expired, so it cannot currently be asserted to block a US generic launch. A generic product may still implicate other unexpired patents or regulatory exclusivities.

Does an enteric-coated omeprazole tablet infringe claim 1?

Ordinarily, the express "not enteric-coated" limitation would make an enteric-coated product outside claim 1. The product would require separate analysis under other claims, patents or claim-construction positions.

Why was sodium bicarbonate important to the claimed invention?

Sodium bicarbonate supplied alkaline buffering capacity, neutralized gastric acid and raised gastric pH when the PPI contacted gastric fluid. The claims quantify the required buffer relationship in milliequivalents per milligram of PPI.

Are the listed flavors independently patent-protected?

No. Claims 19 and 20 make flavors dependent formulation limitations. They do not create a separate patent right after expiration and do not independently protect the listed flavors as such.

References

  1. DailyMed. (2024). Zegerid: Omeprazole and sodium bicarbonate capsule and powder for suspension labeling. U.S. National Library of Medicine.

  2. Food and Drug Administration. (2004). Approval letter and prescribing information for Zegerid, NDA 21-302. U.S. Department of Health and Human Services.

  3. Food and Drug Administration. (2024). Approved drug products with therapeutic equivalence evaluations: Orange Book. U.S. Department of Health and Human Services.

  4. Santarus, Inc. v. Par Pharmaceutical, Inc., 694 F.3d 1344 (Fed. Cir. 2012).

  5. U.S. Patent and Trademark Office. (2003). U.S. Patent No. 6,645,988: Pharmaceutical compositions containing proton pump inhibitors. U.S. Department of Commerce.

  6. U.S. Patent and Trademark Office. (2024). Patent Center and patent term information for U.S. Patent No. 6,645,988. U.S. Department of Commerce.

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Drugs Protected by US Patent 6,645,988

Applicant Tradename Generic Name Dosage NDA Approval Date TE Type RLD RS Patent No. Patent Expiration Product Substance Delist Req. Patented / Exclusive Use Submissiondate
>Applicant >Tradename >Generic Name >Dosage >NDA >Approval Date >TE >Type >RLD >RS >Patent No. >Patent Expiration >Product >Substance >Delist Req. >Patented / Exclusive Use >Submissiondate

International Family Members for US Patent 6,645,988

Country Patent Number Estimated Expiration Supplementary Protection Certificate SPC Country SPC Expiration
Argentina 038157 ⤷  Start Trial
Austria 340574 ⤷  Start Trial
Australia 1907100 ⤷  Start Trial
Australia 2002330863 ⤷  Start Trial
Australia 2003214858 ⤷  Start Trial
Australia 2005229686 ⤷  Start Trial
Australia 3276701 ⤷  Start Trial
>Country >Patent Number >Estimated Expiration >Supplementary Protection Certificate >SPC Country >SPC Expiration

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