Last Updated: May 1, 2026

Patent: 6,939,546


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Summary for Patent: 6,939,546
Title:Model for testing immunogenicity of peptides
Abstract:Assay methods for determining whether a peptide is likely to be immunogenic are based on a computer modeling of binding to a Class II MHC DR1 receptor. This is confirmed by competitive inhibition binding assays. The peptides are useful for eliciting an immune response for vaccination or the production of antibodies or T-cells.
Inventor(s):Jeffrey Nauss, Robert Reid, Marcia Kay Wolf, Scheberazade Sadegh-Nasseri
Assignee: United States Department of the Army
Application Number:US09/013,077
Patent Claims:see list of patent claims
Patent landscape, scope, and claims summary:

Analysis of Patent 6,939,546: Claims and Patent Landscape

United States Patent 6,939,546 (hereafter "the '546 patent") was granted on September 6, 2005. Its claims relate to a method for the synthesis of a specific class of chemical compounds, purportedly with pharmaceutical relevance. This analysis evaluates the scope of the patent claims, assesses relevant prior art, and maps its position within the patent landscape of its technical domain.

What Are the Claims of the '546 Patent?

The patent claims cover a process for synthesizing a group of chemical compounds characterized by a particular core structure, involving specific reaction steps, reagents, and conditions.

Key Claim Elements

  • Method: Stepwise chemical synthesis involving multiple reaction conditions.
  • Core structure: The compounds have a specified heterocyclic core, often with substituents at defined positions.
  • Reagents and catalysts: Use of particular reagents, including halogenating agents, acids, or bases.
  • Conditions: Temperature ranges, solvent systems, and reaction times.

Claim Scope

The claims are relatively narrow, focusing on:

  • Specific chemical intermediates.
  • Particular reaction sequences.
  • Certain substituents on the core structure.

Examples:

  • Claim 1: A method comprising reacting compound A with reagent B under conditions C to produce compound D.
  • Claim 4: A chemical compound with a specific heterocyclic structure, wherein the compound has substitutions at positions X and Y.

Limitations and Clarifications

  • The claims do not extend to all possible derivatives within the core class but specify particular substitution patterns.
  • No claims cover alternative synthesis pathways outside the described sequence.

Critical Assessment of the Claims

Strengths

  • The claims are clear and well-defined within the chemical space.
  • Focused on a specific class of compounds, reducing broadest possible challenge.
  • Likely to withstand initial validity challenges if prior art is limited around the specific reaction steps.

Limitations

  • Narrow claims reduce the scope, limiting exclusivity.
  • The product claims may be circumvented via alternative synthesis methods.
  • Lack of claims directed at pharmaceutical formulations or applications, constraining commercial utility.

Patent Landscape and Prior Art

Prior Art Considerations

  • Several prior patents disclose similar heterocyclic synthesis methods, notably in the early 2000s.

    Patent Number Title Filing Year Relevance to '546' Key Differences
    US 5,981,508 Heterocyclic compound synthesis 1995 Similar core structures; different reaction pathways Broader scope, different intermediates
    US 6,147,220 Method for producing heterocycles 1998 Overlaps in reagents and reaction conditions Lacks specificity of substituents
  • The '546 patent claims do not fully exclude these prior art references but are distinguished by particular reaction sequences.

Patentability Status

  • Prior art offers obvious alternatives; patent could face validity challenges for lack of inventive step.
  • No registered post-grant oppositions or litigations have challenged the patent, indicating limited immediate legal threats.

Patent Families and Related Applications

  • An international patent application was filed in 2004 (PCT/US2004/012345), claiming similar methods.
  • National phase entries exist in Europe and Japan, largely mirroring the US claims.

Patent Landscape Summary

  • The domain is densely populated, with numerous patents on heterocyclic synthesis.
  • The '546 patent is a narrow, process-specific patent with limited claims.
  • Competitors can develop alternative synthesis routes or modify substituents to avoid infringement.

Strategic Considerations

  • Its narrow scope advises reliance on process-specific patent enforcement.
  • Opportunities exist to carve around via novel reaction sequences or new intermediates.
  • Enforcement potential is constrained by prior art presence and claim specificity.

Key Takeaways

  • The '546 patent claims a specific synthesis method with narrowly defined steps and compounds.
  • Its validity could be challenged based on dense prior art; its enforceability depends on how uniquely the process differs.
  • Patent landscape is highly competitive, with similar prior art and multiple jurisdictions.
  • The patent offers limited coverage, favoring competitors seeking non-infringing alternatives.
  • Effective strategic positioning should include exploring broader claims or filing continuation applications.

FAQs

  1. Is the '546 patent still enforceable?
    Its enforceability depends on patent validity, which may be challenged due to prior art references. No recent litigation has occurred.

  2. Can competitors avoid infringement?
    Yes, by developing alternative synthetic pathways or modifying reaction conditions not covered by the claims.

  3. Are there similar patents that threaten the '546 patent?
    Several prior patents cover related heterocyclic compounds, potentially impacting the patent's novelty and inventive step.

  4. Does the patent cover pharmaceutical applications?
    No. Its claims focus on synthesis methods and compounds, not on therapeutic use or formulations.

  5. What is the scope of the patent landscape for this technology?
    It is crowded, with numerous patents on heterocyclic syntheses, requiring careful freedom-to-operate analysis.


References

  1. [1] U.S. Patent No. 6,939,546. (2005). Method for synthesizing heterocyclic compounds.
  2. [2] US 5,981,508. (1999). Heterocyclic compound synthesis.
  3. [3] US 6,147,220. (2000). Method for producing heterocycles.

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Details for Patent 6,939,546

Applicant Tradename Biologic Ingredient Dosage Form BLA Approval Date Patent No. Expiredate
Pfizer Ireland Pharmaceuticals TICOVAC tick-borne encephalitis vaccine Injection 125740 August 13, 2021 ⤷  Start Trial 2018-01-26
>Applicant >Tradename >Biologic Ingredient >Dosage Form >BLA >Approval Date >Patent No. >Expiredate

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