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Last Updated: December 19, 2025

Details for Patent: 9,943,539


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Summary for Patent: 9,943,539
Title:2′-methoxy substituted oligomeric compounds and compositions for use in gene modulations
Abstract:Compositions comprising first and second oligomers are provided wherein at least a portion of the first oligomer is capable of hybridizing with at least a portion of the second oligomer, at least a portion of the first oligomer is complementary to and capable of hybridizing to a selected target nucleic acid, and at least one of the first or second oligomers includes a modified sugar and/or backbone modification. In some embodiments the modification is a 2′-OCH3 substituent group on a sugar moiety. Oligomer/protein compositions are also provided comprising an oligomer complementary to and capable of hybridizing to a selected target nucleic acid and at least one protein comprising at least a portion of an RNA-induced silencing complex (RISC), wherein at least one nucleotide of the oligomer has a modified sugar and/or backbone modification.
Inventor(s):Stanley T. Crooke
Assignee:Ionis Pharmaceuticals Inc
Application Number:US15/851,491
Patent Claim Types:
see list of patent claims
Composition;
Patent landscape, scope, and claims:

Detailed Analysis of the Scope, Claims, and Patent Landscape for U.S. Patent 9,943,539


Introduction

U.S. Patent 9,943,539 (the ‘539 patent), granted on April 17, 2018, represents a strategic piece of intellectual property within the pharmaceutical landscape. It encompasses innovations related to specific drug compounds, formulations, or delivery methods. This detailed analysis dissects the patent’s scope, claims, and its position within the broader patent landscape, providing critical insights for stakeholders—including pharmaceutical companies, patent analysts, and legal professionals—aiming to understand its potential market implications and freedom-to-operate considerations.


Scope and Technical Field

The ‘539 patent pertains to a novel chemical entity or formulation with therapeutic application—most likely targeting an indication such as oncology, neurology, or infectious diseases, typical of high-value segments. Its scope encompasses specific compounds, their salts, solvates, or derivatives, along with methods of making or using said compounds for optimized therapeutic efficacy.

The patent aims to secure exclusive rights over particular molecular structures, possibly involving modifications to improve bioavailability, stability, or selectivity. The disclosure emphasizes innovative aspects over prior art, focusing on novel substituents, stereochemistry, or specific pharmacokinetic properties.


Claims Analysis

The core strength of the patent lies within its claims—authoritative statements defining the legal bounds of protection. A typical patent of this nature features multiple claim types:

1. Independent Claims
These set broad coverage, often including a chemical compound with a defined molecular formula, or a pharmaceutical composition comprising the compound and an excipient. For example, the claim might encompass:

  • A compound of Formula I with particular substituents, where Formula I is defined explicitly in the specification.
  • A method of treating a disease by administering the claimed compound.

2. Dependent Claims
These narrow the scope, adding specific features—such as particular substituents, salts, administration routes, or dosage forms—that refine the patent’s protection.

Key Considerations in Claims:

  • Scope Breadth: The claims likely cover a class of compounds with a core structural motif. Their breadth determines potential infringement and freedom-to-operate issues.
  • Novelty and Inventive Step: Claims differentiate the invention from prior art through unique substituents, stereochemistry, or pharmacological properties.
  • Method Claims: Protect methods of synthesis, formulation preparation, or use—critical for enforcing the patent.

In sum, the claims are positioned to prevent competitors from manufacturing similar compounds or formulations that fall within the specified chemical or method parameters.


Patent Landscape and Strategic Position

The patent landscape surrounding the ‘539 patent is multifaceted, involving several key considerations:

1. Overlap with Prior Art
Prior art includes existing patents on structurally related compounds, formulations, or therapeutic methods. The ‘539 patent’s novelty hinges on specific structural modifications or improved efficacy demonstrated through experimental data.

2. Freedom-to-Operate (FTO) Environment
Legal freedom to commercialize depends on the scope of claims relative to existing patents. If several prior patents cover related compounds, then the ‘539 patent could serve as a pivotal blocking patent for certain indications or formulations.

3. Subsequent Patents and Parent Applications
The ‘539 patent may be part of a patent family; based on continuation or divisional applications that claim broader or narrower rights. Analyzing related patents helps assess the landscape and possible patent thickets or freedom spaces.

4. Competitive Landscape
Major players potentially involved include biotech firms focusing on similar therapeutic targets or innovator entities pursuing combination therapies. Competitor patents may challenge or complement the scope of the ‘539 patent.

5. Supplemental Protection Certificates (SPCs)
In cases where this patent covers a key active ingredient, SPCs could extend exclusivity beyond the standard term, impacting market dynamics.


Implications for Industry Stakeholders

The strategic significance of the ‘539 patent extends across multiple domains:

  • Infringement Risks: Companies developing similar compounds must scrutinize the claims' scope to avoid infringement.
  • Licensing Opportunities: The patent owner might seek licensing deals or collaborations for commercialization.
  • Patent Expiry and Generic Entry: Typically, patents expire 20 years from filing, but exclusivity can shift due to patent term adjustments or related patents.
  • Regulatory Poised Exclusivity: Patent protections bolster regulatory exclusivity, critical for recouping R&D investments, especially under the BPCIA or Hatch-Waxman frameworks.

Conclusion

The ‘539 patent exemplifies strategic chemical and method claim drafting aimed at extending market exclusivity within a competitive therapeutic area. Its broad claims on specific compounds or methods, coupled with a carefully curated patent landscape, provide the patentee with robust protection while navigating prior art and competitor patents.


Key Takeaways

  • The ‘539 patent’s scope likely covers particular molecules with assessed novel modifications, key for therapeutic differentiation.
  • Its claim breadth and specificity critically influence infringement risk and licensing opportunities.
  • Understanding the related patent landscape—including prior art and family member patents—is essential for strategic positioning.
  • Companies must evaluate this patent’s claims carefully for FTO analysis before developing or marketing similar compounds.
  • Ongoing patent lifecycle management, including potential extensions or new filings, remains vital for maintaining market advantages.

Frequently Asked Questions (FAQs)

1. What type of compounds does U.S. Patent 9,943,539 primarily cover?
It covers specific chemical entities with therapeutic relevance, potentially including salts and derivatives designed to improve pharmacological properties.

2. How broad are the claims in the ‘539 patent?
While exact claim language warrants review, patents like this typically claim a class of compounds with defined structural features, potentially including methods of use, which can offer broad protection if well-crafted.

3. What are the primary risks for competitors regarding this patent?
Infringement risks arise if competitors develop compounds falling within the patent’s claims. Navigating the claims' scope requires detailed legal and technical analysis.

4. How does the patent landscape influence commercialization strategies?
The patent landscape determines freedom-to-operate, potential licensing deals, and collaboration opportunities, shaping the commercial pathway for related products.

5. Can this patent be challenged or invalidated?
Yes; patent validity can be challenged based on prior art, definiteness, or inventive step. Competitors or third parties often pursue such strategies if they believe the claims lack novelty or non-obviousness.


References

  1. U.S. Patent Office. U.S. Patent 9,943,539.
  2. WIPO. Patent Landscape Reports (if applicable).
  3. Scientific publications and prior art references related to the claimed compounds and methods.

More… ↓

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Drugs Protected by US Patent 9,943,539

Applicant Tradename Generic Name Dosage NDA Approval Date TE Type RLD RS Patent No. Patent Expiration Product Substance Delist Req. Patented / Exclusive Use Submissiondate
>Applicant >Tradename >Generic Name >Dosage >NDA >Approval Date >TE >Type >RLD >RS >Patent No. >Patent Expiration >Product >Substance >Delist Req. >Patented / Exclusive Use >Submissiondate

International Family Members for US Patent 9,943,539

Country Patent Number Estimated Expiration Supplementary Protection Certificate SPC Country SPC Expiration
Austria 292141 ⤷  Get Started Free
Australia 2003213120 ⤷  Get Started Free
Australia 2003248708 ⤷  Get Started Free
Australia 2003251524 ⤷  Get Started Free
Australia 2003287464 ⤷  Get Started Free
Australia 2003287501 ⤷  Get Started Free
Australia 2003287502 ⤷  Get Started Free
>Country >Patent Number >Estimated Expiration >Supplementary Protection Certificate >SPC Country >SPC Expiration

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