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Last Updated: April 20, 2024

Details for Patent: 5,726,017


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Title: High affinity HIV-1 gag nucleic acid ligands
Abstract:Methods are described for the identification and preparation of high-affinity nucleic acid ligands to HIV-1 GAG, Included in the invention are specific RNA ligands to HIV-1 GAG identified by the SELEX method, Also included are RNA ligands that inhibit the function of HIV-1 GAG.
Inventor(s): Lochrie; Michael A. (Boulder, CO), Gold; Larry (Boulder, CO)
Assignee: NeXstar Pharmaceuticals, Inc. (Boulder, CO)
Filing Date:May 19, 1995
Application Number:08/447,172
Claims:1. A method for identifying nucleic acid ligands to HIV-1 GAG, comprising:

a) preparing a candidate mixture of nucleic acids;

b) contacting the candidate mixture of nucleic acids with HIV-1 GAG, wherein nucleic acids having an increased affinity to HIV-1 GAG relative to the candidate mixture may be partitioned from the remainder of the candidate mixture;

c) partitioning the increased affinity nucleic acids from the remainder of the candidate mixture; and

d) amplifying the increased affinity nucleic acids to yield a mixture of nucleic acids enriched for nucleic acids with relatively higher affinity and specificity for binding to HIV-1 GAG, whereby nucleic acids ligands to HIV-1 GAG may be identified.

2. The method of claim 1 further comprising:

e) repeating steps b), c), and d).

3. The method of claim 1 wherein said candidate mixture of nucleic acids is comprised of single stranded nucleic acids.

4. The method of claim 3 wherein said single stranded nucleic acids are ribonucleic acids.

5. The method of claim 4 wherein said candidate mixture of nucleic acids comprises modified nucleic acids.

6. The method of claim 5 wherein said candidate mixture of nucleic acids comprises 2'-amino (2'-NH.sub.2) modified nucleic acids.

7. The method of claim 5 wherein said candidate mixture of nucleic acids comprises 2'-fluoro (2'-F) modified nucleic acids.

8. A nucleic acid ligand to HIV-1 GAG identified according to the method of claim 1.

9. A purified and isolated non-naturally occurring RNA ligand to HIV-1 GAG wherein said ligand is selected from the group consisting of the sequences set forth in SEQ ID NOS. 8-27 and 34-46.

10. A purified and isolated non-naturally occurring nucleic acid ligand to HIV-1 GAG.

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